Breakthrough in childhood brain cancer research reveals possible new target for therapies

DMG is a tumour that develops deep in the brain and primarily affects children and young adults. Nearly all cases carry a key genetic change: a mutation in a protein called histone H3, which helps package DNA inside cells. This mutation disrupts a crucial chemical mark—known as H3K27me3—that normally acts like a stop sign to silence genes. 

Scientists had long believed this disruption caused genes to turn on when they shouldn’t. But in a surprising twist, the researchers behind the new study found that parts of this “stop sign” system still remain—and the tumour actually depends on them to survive. 

Using cutting-edge genetic screens and molecular tools, the team discovered that a very specific gene-silencing complex—called CBX4/PCGF4-cPRC1—is essential for the tumour’s growth. Although it makes up less than 5% of the related silencing machinery in the cancer cells, this particular complex plays an outsized role in shutting down genes that would otherwise prevent the tumour from growing. 

The study also revealed how a previously unknown region in the CBX4 protein helps it form a special partnership with PCGF4, enabling this harmful gene repression.  

“Although this form of PRC1 gene-silencing complex represents less than 5% of PRC1 in these tumours, our research shows it is essential for tumour growth,” said Professor Adrian Bracken, co-lead investigator on the study from Trinity College Dublin’s Smurfit Institute of Genetics. 

“By specifically targeting this rare form of PRC1, it may be possible to develop more precise treatments that minimise side effects that can arise with broader-acting therapies.”

Dr Gerard Brien, co-lead investigator from the University of Edinburgh, added: “This discovery sheds light on a key mechanism driving DMG and identifies CBX4 as a promising drug target. Our findings suggest that interfering with CBX4's interaction with chromatin or its partner protein PCGF4 could disrupt the tumour's gene-silencing machinery — potentially paving the way for new treatment strategies against this devastating disease.”

This work was led by two outstanding former PhD researchers from the Bracken Lab, Dr Eimear Lagan and Dr Daire Gannon, who collaborated closely throughout their doctoral studies to address this challenging disease. Dr Lagan completed her PhD under the joint supervision of Dr Bracken and Dr Gerry Brien, conducting her final research in Dr Brien’s lab at the University of Edinburgh.

Claire Kilty, Head of Research at the Irish Cancer Society, said: “The findings in this important piece of research have identified new targets for treatment for a rare and incurable form of childhood brain cancer. The Irish Cancer Society is proud to have provided funding for this research, which could potentially lead to a new treatment pathway for a currently incurable cancer.

“Cancer research in Ireland has a huge impact on the lives of people affected by cancer. It is a driving force in improving treatments and outcomes, and quality of life after cancer. We are proud to be the largest voluntary funder of cancer research in the State, which is made possible through the generosity of the public. We envision a future where everyone survives cancer, and funding groundbreaking cancer research like this brings us closer to that goal.”

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