(Press-News.org) AUBURN, AL – In July, as many enjoyed the hot weather at Alabama's gulf coast beaches, in the Leach Science Center, Auburn University's Department of Physics hosted an engaging scientific event. For the first time since 2016, the southern USA was home to the “Hands-On Workshop on Computational Biophysics” with Auburn University, for the first time, as its esteemed host.
Under the guidance of Prof. Rafael Bernardi from Auburn University's Department of Physics and Prof. Emad Tajkhorshid of the Beckman Institute at the University of Illinois at Urbana-Champaign, the workshop showcased expertise from the renowned developers of NAMD and VMD. Participants were provided an in-depth dive into advanced molecular dynamics simulations, nanotechnology simulations, and biomolecular visualization.
“Our computational biophysics course is a great opportunity for learning how to use molecular dynamics tools from its developers,” stated Prof. Bernardi. He further emphasized the innovative tools introduced, mentioning, “The workshop included an overview of Cybershuttle, our new tool for launching simulations in supercomputer centers, developed in collaboration with a team at Indiana University.”
At its core, the workshop blends conceptual lectures with hands-on activities, ensuring that participants not only understand the underlying scientific concepts but also gain practical experience. The program includes introductory lectures, followed by interactive computer lab sessions where participants engage directly with experts through guided tutorials.
Highlighting its rich history and consistent record of excellence, this was the 60th edition of a workshop series that has, since its inception in 2003, trained over 2,500 scientists globally. The workshop's esteemed reputation has drawn a diverse array of participants globally, with the latest edition welcoming attendees from the USA, Europe, and Latin America.
Prof. Bernardi proudly reflected on the impact of the workshop over the years, "This was the 60th edition of the workshop that has trained thousands of molecular dynamics users. It’s exciting to see its growth, with participants traveling from all corners of the world, making Auburn University a nexus for knowledge exchange in computational biophysics."
More information about future workshops can be found at the NIH Center from Macromolecular Modeling and Visualization website https://www.ks.uiuc.edu/Training/Workshop/.
This workshop marks another achievement for Auburn University in fostering educational excellence and advancing scientific knowledge.
END
Auburn University hosts the 60th edition of the Renowned Computational Biophysics Workshop
Diving deep into molecular dynamics: NAMD and VMD take center stage at Auburn
2023-08-18
ELSE PRESS RELEASES FROM THIS DATE:
Reviewing MAFLD opens new treatment pathways
2023-08-18
Non-alcoholic fatty liver disease (NAFLD) is a common condition that affects up to 30% of adults in the general population. It is characterized by the accumulation of fat in the liver. It is often associated with other conditions, such as obesity, type 2 diabetes, and metabolic syndrome. The new definition of metabolic dysfunction-associated fatty liver disease (MAFLD) was proposed in 2020. MAFLD is diagnosed based on hepatic steatosis (fatty liver) and at least one of three metabolic risk abnormalities: overweight/obesity, type 2 diabetes, or evidence of metabolic dysregulation.
A recent meta-analysis led by Ming-Hua Zheng from the First Affiliated Hospital ...
Looking at the latest in Life Sciences Discovery and Technology
2023-08-18
Oak Brook, IL – The August 2023 issue of SLAS Technology, the open access journal emphasizing scientific and technical advances across the life sciences, is now available. Volume 28, Issue 4, contains a review from the literature and eight full-length articles covering nanodiamonds, automated buffer exchange, epidermal growth factor (EGF) and other laboratory automation-related research.
From the Literature
Life sciences discovery and technology highlights
The authors examine several areas of research within the literature to highlight significant developments ...
A simple mouth rinse could spot early heart disease risk
2023-08-18
What if we could identify the earliest warning signs of cardiovascular disease from a simple saliva sample? Scientists think they have found a way to do so. Gum inflammation leads to periodontitis, which is linked with cardiovascular disease. The team used a simple oral rinse to see if levels of white blood cells — an indicator of gum inflammation — in the saliva of healthy adults could be linked to warning signs for cardiovascular disease. They found that high levels correlated with compromised flow-mediated dilation, an early indicator of poor arterial health.
“Even in young healthy adults, low levels of oral inflammatory load may have an impact on cardiovascular ...
Texas A&M study finds secondhand smoke may be source of lead exposure in children
2023-08-18
Lead exposure has long been a known health risk, especially for young children. Research has found that even at low levels, chronic exposure to lead can cause damage to the brain and other organs and cause problems with cognitive and motor skills. In response, public health officials have determined that there is no safe exposure level and have made great efforts to eliminate lead-based paint and lead pipes in homes and phase out the use of leaded gasoline.
But another possible source of lead exposure in children has been largely overlooked: secondhand ...
Researchers to explore 3D printing medication tailored to pediatric patients
2023-08-18
Researchers at Texas A&M University will spearhead a groundbreaking project to revolutionize medication administration for pediatric patients, thanks to an approximately $3 million grant from the National Institutes of Health (NIH).
This pioneering initiative explores using additive manufacturing, or 3D printing, to create customized tablets tailored to the unique needs of young children. The project is an interdisciplinary collaboration of experts from the College of Engineering, the College of Pharmacy and the School of Veterinary Medicine and Biomedical Sciences.
Traditional manufacturing methods yield mass-produced medicinal tablets ...
Diagnosis of voice condition from call audio
2023-08-18
Overview
Assistant Professor Yuya Hosoda of the Center for IT-Based Education (CITE), Toyohashi University of Technology developed a method for estimating the pitch of vocal cord vibrations of humans from call audio. In this method, the pitch is estimated by integrating the feature quantities extracted from the amplitude and phase spectra of speech on the complex plane. Through experiments, we have demonstrated that the proposed method is not only efficient for call audios whose frequency band is restricted by communication standards, but also works robustly in an environment with background ...
New insights into the protein-mediated motor neuron loss in amyotrophic lateral sclerosis
2023-08-18
Niigata, Japan – our movements are controlled by multiple neural pathways that connect the brain and spinal cord. In particular, neurons in the cerebral cortex send commands to the motor neurons in the spinal cord and then to the muscles, thus eliciting the required movement. However, this flow of neural information is compromised in amyotrophic lateral sclerosis (ALS)—a widespread progressive neurodegenerative disease in which the muscles gradually atrophy, making movement and breathing difficult. Moreover, a protein called TDP-43 has been found to abnormally ...
Invasive orange pore fungus wins third BMC Ecology and Evolution image competition
2023-08-18
A striking image of the invasive orange pore fungus (Favolaschia calocera), which highlights the potential threats the species may pose to Australian ecosystems, has won the third BMC Ecology and Evolution image competition. The competition showcases the wonder of the natural world — both past and present — and celebrates those working to understand it. The winning images are open access and freely available for use under a Creative Commons Attribution 4.0 (CCBY) license.
The overall winning image depicts bright ...
Scientists zero in on timing, causes of ice age mammal extinctions in southern California
2023-08-18
The end of the last Ice Age also marked the end for more than three dozen genera of large mammals in North America, from mammoths and mastodons to bison and saber-toothed cats. Details concerning the precise timing and circumstances, however, have remained murky ever since.
A team of scientists that included Texas A&M University archaeologist Dr. Michael Waters recently focused on the well-known Rancho La Brea Tar Pits in southern California in their quest to provide answers to these questions, resulting in the most exact and detailed timeline for the extinctions that happened during the latter part of the Pleistocene ...
Alarm as FDA fast-tracks first antipsychotic drug for agitation in dementia
2023-08-18
In trials, the antipsychotic drug brexpiprazole (Rexulti) failed to provide a clinically meaningful benefit and increased the risk of death. Yet the US Food and Drug Administration (FDA) has fast tracked its approval, making Rexulti the first antipsychotic for treating agitation in elderly patients with dementia.
At a cost of around $1,400 a month Rexulti’s makers, Otsuka and Lundbeck, are forecasting an additional $1 billion in annual sales, but there are serious questions about the harm-benefit balance of this drug, writes investigative journalist Robert Whitaker in The BMJ today.
The decision may also reverse ...
LAST 30 PRESS RELEASES:
Climate change exposure associated with increased emergency imaging
Incorrect AI advice influences diagnostic decisions
Building roots in glass, a bio-inspired approach to creating 3D microvascular networks using plants and fungi
Spinning fusion fuel for efficiency
The American Pediatric Society names Dr. Beth Tarini as the recipient of the 2025 Norman J. Siegel New Member Outstanding Science Award
New Clinical Study Confirms the Anti-Obesity Effects of Kimchi
Highly selective pathway for propyne semihydrogenation achieved via CoSb intermetallic catalyst
GERD linked to cardiovascular risk factors: New insights from Mendelian randomization study
Content moderators are influenced by online misinformation
Adulting, nerdiness and the importance of single-panel comics
Study helps explain how children learned for 99% of human history
The impact of misinformation on Spanish-language social media platforms
Populations overheat as major cities fail canopy goals: new research
By exerting “crowd control” over mouse cells, scientists make progress towards engineering tissues
First American Gastroenterological Association living guideline for moderate-to-severe ulcerative colitis
Labeling cell particles with barcodes
Groundwater pumping drives rapid sinking in California
Neuroscientists discover how the brain slows anxious breathing
New ion speed record holds potential for faster battery charging, biosensing
Haut.AI explores the potential of AI-enhanced fluorescence photography for non-invasive skin diagnostics
7-year study reveals plastic fragments from all over the globe are rising rapidly in the North Pacific Garbage Patch
New theory reveals the shape of a single photon
We could soon use AI to detect brain tumors
TAMEST recognizes Lyda Hill and Lyda Hill Philanthropies with Kay Bailey Hutchison Distinguished Service Award
Establishment of an immortalized red river hog blood-derived macrophage cell line
Neural networks: You might not need to buy every ticket to win the lottery
Healthy New Town: Revitalizing neighborhoods in the wake of aging populations
High exposure to everyday chemicals linked to asthma risk in children
How can brands address growing consumer scepticism?
New paradigm of quantum information technology revealed through light-matter interaction!
[Press-News.org] Auburn University hosts the 60th edition of the Renowned Computational Biophysics WorkshopDiving deep into molecular dynamics: NAMD and VMD take center stage at Auburn