PRESS-NEWS.org - Press Release Distribution
PRESS RELEASES DISTRIBUTION

TopoChip reveals the Braille code of cells

2013-10-24
(Press-News.org) Contact information: Catherine Meyers
cmeyers@aip.org
301-209-3088
American Institute of Physics
TopoChip reveals the Braille code of cells Cells in the human body change shape as they crawl, split, or cling to other surfaces, but while the scientific literature is filled with examples of how cell shapes shift in response to things they touch, little is known about the rules that govern these changes. And there has been no high-throughput way to systematically test different topologies against different types of cells to optimize the surface of something like a medical implant.

"We don't know the Braille codes of cells," said biologist Jan de Boer of the University of Twente in the Netherlands.

To address this gap in understanding, de Boer and his team of researchers have designed a systematic way to discover how a cell changes shape in response to a range of topographies. Their massive screening approach, which uses a platform called the TopoChip, tests thousands of surface patterns and catalogs how cells react to them, similar to the way pharmaceutical companies screen whole libraries of compounds in their search for promising drugs.

De Boer will describe his team's latest findings using the TopoChip, and how this work could influence the design of better surfaces for medical implants, at the AVS 60th International Symposium and Exhibition, to be held Oct. 27-Nov. 1, 2013, in Long Beach, Calif.

"Our unique approach is, we don't design a few surfaces – we design thousands of them," de Boer said. So far they have selected 2,173 patterns out of their library of over 150 million unique topographies and can make more.

To develop their technique, the team wrote an algorithm that generates unique patterns in silicon: pillars just a few micrometers across with combinations of geometric shapes such as triangles, rectangles, and circles, spaced various distances apart from each other and with differences in size and orientation. The silicon patterns are used as molds to make imprints onto polymeric surfaces, which can be coated with a ceramic or metal when desired. The researchers employ the TopoChip to grow cells on these surfaces, then use high-content imaging to see how the cells respond.

Of the dozen types of cells they have tested, all have responded to at least some of the patterns, though different types of cells respond in different ways. "Sometimes cells sit on top of the pillars, sometimes between them," de Boer said. "Sometimes they wrap themselves around them." These drastic changes in shape are thought to have a biological effect on the cells, for instance by changing behavior such as proliferation rates.

By analyzing the data, the team is now able to predict how that cell will change its shape in response to a particular type of geometric arrangement of the pillars.

Learning the Braille code of cells has potential applications in the world of artificial implants, which include heart valves, dental implants, and artificial joints. Our bodies respond to some of these implants in negative ways, for example forming scar tissue around the foreign object. By creating medical implant surfaces that speak the language of cells, researchers may be able to elicit more positive reactions.

"What is nice about this approach is we don't need coatings. We don't need to change chemistry or biology. All we change is surface topography," de Boer said. Eventually, he continues, it could be a very powerful approach to improving the performance of medical devices.

Next steps for his team include finding out how many unique patterns there are that can elicit a unique response. De Boer is also beginning to collaborate with genomics researchers to get more insight into what is happening inside the cell as it changes shape. And to facilitate making the TopoChip platform available to medical device manufacturers, de Boer and colleagues have established a spin-off company, Materiomics B.V., to perform individualized screens on request.

###

Presentation BI-WeM4, "Do Cells Read Braille? High Throughput Screening of Surface Topography-Induced Cellular Responses," is at 9:00 a.m. Pacific Time on Wednesday, Oct. 30, 2013.

MORE INFORMATION ABOUT THE AVS 60th INTERNATIONAL SYMPOSIUM & EXHIBITION
The Long Beach Convention Center is located at 300 E. Ocean Blvd., Long Beach, CA 90802.

USEFUL LINKS
Main meeting website: http://www2.avs.org/symposium/AVS60/pages/info.html
Technical Program: http://www.avssymposium.org/

PRESSROOM
The AVS Pressroom will be located in the Long Beach Convention Center. Pressroom hours are Monday-Thursday, 8:00 a.m. - 5:00 p.m. Your press badge will allow you to utilize the pressroom to write, interview, collect new product releases, review material, or just relax. The press badge will also admit you, free of charge, into the exhibit area, lectures, and technical sessions, as well as the Welcome Mixer on Monday Evening and the Awards Ceremony and Reception on Wednesday night.

This news release was prepared for AVS by the American Institute of Physics (AIP).

ABOUT AVS
Founded in 1953, AVS is a not-for-profit professional society that promotes communication between academia, government laboratories, and industry for the purpose of sharing research and development findings over a broad range of technologically relevant topics. Its symposia and journals provide an important forum for the dissemination of information in many areas of science and technology, enabling a critical gateway for the rapid insertion of scientific breakthroughs into manufacturing realities.

END



ELSE PRESS RELEASES FROM THIS DATE:

Uncovering the tricks of nature's ice-seeding bacteria

2013-10-24
Uncovering the tricks of nature's ice-seeding bacteria Like the Marvel Comics superhero Iceman, some bacteria have harnessed frozen water as a weapon. Species such as Pseudomonas syringae have special proteins embedded in their outer membranes that help ice ...

First-ever Information Systems Job Index shows healthy market for college students

2013-10-24
First-ever Information Systems Job Index shows healthy market for college students Despite a 7.2 percent national unemployment rate, the job market is a healthy one for college students majoring in information systems, with nearly three quarters of students receiving ...

Berkeley Lab researchers get a detailed look at a DNA repair protein in action

2013-10-24
Berkeley Lab researchers get a detailed look at a DNA repair protein in action Provides new insight into genome integrity and biological detection of mismatched DNA Errors in the human genetic code that arise from mismatched nucleotide base pairs in ...

Induced pluripotent stem cells reveal differences between humans and great apes

2013-10-24
Induced pluripotent stem cells reveal differences between humans and great apes Key differences in the regulation of jumping genes may have arisen relatively recently in evolution LA JOLLA, CA---- Researchers at the Salk Institute for Biological Studies have, for the first time, ...

Birthing a new breed of materials

2013-10-24
Birthing a new breed of materials Where two different materials meet on the atomic level, a new material can be born that is neither one nor the other. The two parent materials do not mix – they remain distinct from one another – but their marriage begets ...

Vacuums provide solid ground for new definition of kilogram

2013-10-24
Vacuums provide solid ground for new definition of kilogram Of all the standard units currently in use around the world, the kilogram – the official unit of mass in the International System of Units (SI) – is the only one that still relies on a physical object ...

Ignorance is sometimes bliss

2013-10-24
Ignorance is sometimes bliss A range of examples suggests a lack of information about their fellows can favor cooperation and prevent conflict among animals -- and even among genes For the Oct. 16 issue of Biology Letters, a special issue commemorating the 50th ...

Researchers capture images of open channel that moves proteins across cell membranes

2013-10-24
Researchers capture images of open channel that moves proteins across cell membranes (Boston) – Similar to passengers on an urban transit system, every protein made in the cell has a specific destination and function. Channels in cell membranes ...

A protein safeguards against cataracts

2013-10-24
A protein safeguards against cataracts Activation mechanism of a protective protein in the ocular lens resolved This news release is available in German. The lens of the human eye is made up of a highly concentrated protein solution ...

UCSB anthropologist examines the motivating factors behind hazing

2013-10-24
UCSB anthropologist examines the motivating factors behind hazing (Santa Barbara, Calif.) –– It happens in military units, street gangs and even among athletes on sports teams. In some cultures, the rituals mark the transition from adolescence ...

LAST 30 PRESS RELEASES:

Dynamically reconfigurable topological routing in nonlinear photonic systems

Crystallographic engineering enables fast low‑temperature ion transport of TiNb2O7 for cold‑region lithium‑ion batteries

Ultrafast sulfur redox dynamics enabled by a PPy@N‑TiO2 Z‑scheme heterojunction photoelectrode for photo‑assisted lithium–sulfur batteries

Optimized biochar use could cut China’s cropland nitrous oxide emissions by up to half

Neural progesterone receptors link ovulation and sexual receptivity in medaka

A new Japanese study investigates how tariff policies influence long-run economic growth

Mental trauma succeeds 1 in 7 dog related injuries, claims data suggest

Breastfeeding may lower mums’ later life depression/anxiety risks for up to 10 years after pregnancy

Study finds more than a quarter of adults worldwide could benefit from GLP-1 medications for weight loss

Hobbies don’t just improve personal lives, they can boost workplace creativity too

Study shows federal safety metric inappropriately penalizes hospitals for lifesaving stroke procedures

Improving sleep isn’t enough: researchers highlight daytime function as key to assessing insomnia treatments

Rice Brain Institute awards first seed grants to jump-start collaborative brain health research

Personalizing cancer treatments significantly improve outcome success

UW researchers analyzed which anthologized writers and books get checked out the most from Seattle Public Library

Study finds food waste compost less effective than potting mix alone

UCLA receives $7.3 million for wide-ranging cannabis research

Why this little-known birth control option deserves more attention

Johns Hopkins-led team creates first map of nerve circuitry in bone, identifies key signals for bone repair

UC Irvine astronomers spot largest known stream of super-heated gas in the universe

Research shows how immune system reacts to pig kidney transplants in living patients

Dark stars could help solve three pressing puzzles of the high-redshift universe

Manganese gets its moment as a potential fuel cell catalyst

“Gifted word learner” dogs can pick up new words by overhearing their owners’ talk

More data, more sharing can help avoid misinterpreting “smoking gun” signals in topological physics

An illegal fentanyl supply shock may have contributed to a dramatic decline in deaths

Some dogs can learn new words by eavesdropping on their owners

Scientists trace facial gestures back to their source. before a smile appears, the brain has already decided

Is “Smoking Gun” evidence enough to prove scientific discovery?

Scientists find microbes enhance the benefits of trees by removing greenhouse gases

[Press-News.org] TopoChip reveals the Braille code of cells