PRESS-NEWS.org - Press Release Distribution
PRESS RELEASES DISTRIBUTION

TopoChip reveals the Braille code of cells

2013-10-24
(Press-News.org) Contact information: Catherine Meyers
cmeyers@aip.org
301-209-3088
American Institute of Physics
TopoChip reveals the Braille code of cells Cells in the human body change shape as they crawl, split, or cling to other surfaces, but while the scientific literature is filled with examples of how cell shapes shift in response to things they touch, little is known about the rules that govern these changes. And there has been no high-throughput way to systematically test different topologies against different types of cells to optimize the surface of something like a medical implant.

"We don't know the Braille codes of cells," said biologist Jan de Boer of the University of Twente in the Netherlands.

To address this gap in understanding, de Boer and his team of researchers have designed a systematic way to discover how a cell changes shape in response to a range of topographies. Their massive screening approach, which uses a platform called the TopoChip, tests thousands of surface patterns and catalogs how cells react to them, similar to the way pharmaceutical companies screen whole libraries of compounds in their search for promising drugs.

De Boer will describe his team's latest findings using the TopoChip, and how this work could influence the design of better surfaces for medical implants, at the AVS 60th International Symposium and Exhibition, to be held Oct. 27-Nov. 1, 2013, in Long Beach, Calif.

"Our unique approach is, we don't design a few surfaces – we design thousands of them," de Boer said. So far they have selected 2,173 patterns out of their library of over 150 million unique topographies and can make more.

To develop their technique, the team wrote an algorithm that generates unique patterns in silicon: pillars just a few micrometers across with combinations of geometric shapes such as triangles, rectangles, and circles, spaced various distances apart from each other and with differences in size and orientation. The silicon patterns are used as molds to make imprints onto polymeric surfaces, which can be coated with a ceramic or metal when desired. The researchers employ the TopoChip to grow cells on these surfaces, then use high-content imaging to see how the cells respond.

Of the dozen types of cells they have tested, all have responded to at least some of the patterns, though different types of cells respond in different ways. "Sometimes cells sit on top of the pillars, sometimes between them," de Boer said. "Sometimes they wrap themselves around them." These drastic changes in shape are thought to have a biological effect on the cells, for instance by changing behavior such as proliferation rates.

By analyzing the data, the team is now able to predict how that cell will change its shape in response to a particular type of geometric arrangement of the pillars.

Learning the Braille code of cells has potential applications in the world of artificial implants, which include heart valves, dental implants, and artificial joints. Our bodies respond to some of these implants in negative ways, for example forming scar tissue around the foreign object. By creating medical implant surfaces that speak the language of cells, researchers may be able to elicit more positive reactions.

"What is nice about this approach is we don't need coatings. We don't need to change chemistry or biology. All we change is surface topography," de Boer said. Eventually, he continues, it could be a very powerful approach to improving the performance of medical devices.

Next steps for his team include finding out how many unique patterns there are that can elicit a unique response. De Boer is also beginning to collaborate with genomics researchers to get more insight into what is happening inside the cell as it changes shape. And to facilitate making the TopoChip platform available to medical device manufacturers, de Boer and colleagues have established a spin-off company, Materiomics B.V., to perform individualized screens on request.

###

Presentation BI-WeM4, "Do Cells Read Braille? High Throughput Screening of Surface Topography-Induced Cellular Responses," is at 9:00 a.m. Pacific Time on Wednesday, Oct. 30, 2013.

MORE INFORMATION ABOUT THE AVS 60th INTERNATIONAL SYMPOSIUM & EXHIBITION
The Long Beach Convention Center is located at 300 E. Ocean Blvd., Long Beach, CA 90802.

USEFUL LINKS
Main meeting website: http://www2.avs.org/symposium/AVS60/pages/info.html
Technical Program: http://www.avssymposium.org/

PRESSROOM
The AVS Pressroom will be located in the Long Beach Convention Center. Pressroom hours are Monday-Thursday, 8:00 a.m. - 5:00 p.m. Your press badge will allow you to utilize the pressroom to write, interview, collect new product releases, review material, or just relax. The press badge will also admit you, free of charge, into the exhibit area, lectures, and technical sessions, as well as the Welcome Mixer on Monday Evening and the Awards Ceremony and Reception on Wednesday night.

This news release was prepared for AVS by the American Institute of Physics (AIP).

ABOUT AVS
Founded in 1953, AVS is a not-for-profit professional society that promotes communication between academia, government laboratories, and industry for the purpose of sharing research and development findings over a broad range of technologically relevant topics. Its symposia and journals provide an important forum for the dissemination of information in many areas of science and technology, enabling a critical gateway for the rapid insertion of scientific breakthroughs into manufacturing realities.

END



ELSE PRESS RELEASES FROM THIS DATE:

Uncovering the tricks of nature's ice-seeding bacteria

2013-10-24
Uncovering the tricks of nature's ice-seeding bacteria Like the Marvel Comics superhero Iceman, some bacteria have harnessed frozen water as a weapon. Species such as Pseudomonas syringae have special proteins embedded in their outer membranes that help ice ...

First-ever Information Systems Job Index shows healthy market for college students

2013-10-24
First-ever Information Systems Job Index shows healthy market for college students Despite a 7.2 percent national unemployment rate, the job market is a healthy one for college students majoring in information systems, with nearly three quarters of students receiving ...

Berkeley Lab researchers get a detailed look at a DNA repair protein in action

2013-10-24
Berkeley Lab researchers get a detailed look at a DNA repair protein in action Provides new insight into genome integrity and biological detection of mismatched DNA Errors in the human genetic code that arise from mismatched nucleotide base pairs in ...

Induced pluripotent stem cells reveal differences between humans and great apes

2013-10-24
Induced pluripotent stem cells reveal differences between humans and great apes Key differences in the regulation of jumping genes may have arisen relatively recently in evolution LA JOLLA, CA---- Researchers at the Salk Institute for Biological Studies have, for the first time, ...

Birthing a new breed of materials

2013-10-24
Birthing a new breed of materials Where two different materials meet on the atomic level, a new material can be born that is neither one nor the other. The two parent materials do not mix – they remain distinct from one another – but their marriage begets ...

Vacuums provide solid ground for new definition of kilogram

2013-10-24
Vacuums provide solid ground for new definition of kilogram Of all the standard units currently in use around the world, the kilogram – the official unit of mass in the International System of Units (SI) – is the only one that still relies on a physical object ...

Ignorance is sometimes bliss

2013-10-24
Ignorance is sometimes bliss A range of examples suggests a lack of information about their fellows can favor cooperation and prevent conflict among animals -- and even among genes For the Oct. 16 issue of Biology Letters, a special issue commemorating the 50th ...

Researchers capture images of open channel that moves proteins across cell membranes

2013-10-24
Researchers capture images of open channel that moves proteins across cell membranes (Boston) – Similar to passengers on an urban transit system, every protein made in the cell has a specific destination and function. Channels in cell membranes ...

A protein safeguards against cataracts

2013-10-24
A protein safeguards against cataracts Activation mechanism of a protective protein in the ocular lens resolved This news release is available in German. The lens of the human eye is made up of a highly concentrated protein solution ...

UCSB anthropologist examines the motivating factors behind hazing

2013-10-24
UCSB anthropologist examines the motivating factors behind hazing (Santa Barbara, Calif.) –– It happens in military units, street gangs and even among athletes on sports teams. In some cultures, the rituals mark the transition from adolescence ...

LAST 30 PRESS RELEASES:

Revolutionizing ammonia synthesis: New iron-based catalyst surpasses century-old benchmark

A groundbreaking approach: Researchers at The University of Texas at San Antonio chart the future of neuromorphic computing

Long COVID, Italian scientists discovered the molecular ‘fingerprint’ of the condition in children's blood

Battery-powered electric vehicles now match petrol and diesel counterparts for longevity

MIT method enables protein labeling of tens of millions of densely packed cells in organ-scale tissues

Calculating error-free more easily with two codes

Dissolving clusters of cancer cells to prevent metastases

A therapeutic HPV vaccine could eliminate precancerous cervical lesions

Myth busted: Healthy habits take longer than 21 days to set in

Development of next-generation one-component epoxy with high-temperature stability and flame retardancy

Scaling up neuromorphic computing for more efficient and effective AI everywhere and anytime

Make it worth Weyl: engineering the first semimetallic Weyl quantum crystal

Exercise improves brain function, possibly reducing dementia risk

Diamonds are forever—But not in nanodevices

School-based program for newcomer students boosts mental health, research shows

Adding bridges to stabilize quantum networks

Major uncertainties remain about impact of treatment for gender related distress

Likely 50-fold rise in prevalence of gender related distress from 2011-21 in England

US college graduates live an average of 11 years longer than those who never finish high school

Scientists predict what will be top of the crops in UK by 2080 due to climate change

Study: Physical function of patients at discharge linked to hospital readmission rates

7 schools awarded financial grants to fuel student well-being

NYU Tandon research to improve emergency responses in urban areas with support from NVIDIA

Marcus Freeman named 2024 Paul “Bear” Bryant Coach of the Year

How creating and playing terrific video games can accelerate the battle against cancer

Rooting for resistance: How soybeans tackle nematode invaders is no secret anymore

Beer helps grocery stores tap sales in other categories

New USF study: Surprisingly, pulmonary fibrosis patients with COVID-19 improve

In a landmark study, an NYBG scientist and colleagues find that reforestation stands out among plant-based climate-mitigation strategies as most beneficial for wildlife biodiversity

RSClin® Tool N+ gives more accurate estimates of recurrence risk and individual chemotherapy benefit in node-positive breast cancer

[Press-News.org] TopoChip reveals the Braille code of cells