Novel cause of brain mosaicism and focal epilepsy identified

(Press-News.org) (COLUMBUS, Ohio) – In most people, every cell in their body contains the same genetic information. However, sometimes people can have two or more genetically different sets of cells. This usually happens during fetal development and is known as mosaicism. Sometimes one of those groups of cells has genetic changes that can cause diseases or disorders.

Neurologists, neurosurgeons and genomics experts have been working together to test for mosaicism in brain tissues resected during epilepsy surgery. Research has shown that mosaicism in the brain is a significant contributor to epilepsy.

In a new study, recently published in Nature Genetics, researchers from Nationwide Children’s Hospital describe an alternate origin of brain mosaicism in some children with focal epilepsy.

“About 1 in every 26 people will have epilepsy at some point in their lives. The causes are incredibly diverse, and a mystery in over half of people with epilepsy,” says Adam Ostendorf, MD, a pediatric neurologist at Nationwide Children’s and an author of the study.

About a third of children with epilepsy have drug-resistant seizures that greatly affect their quality of life, safety and developmental outcomes. “We were motivated to study the genetic causes of drug-resistant epilepsy so future research might be able to develop more effective treatments,” says Tracy Bedrosian, PhD, senior author of the paper and principal investigator in the Steve and Cindy Rasmussen Institute for Genomic Medicine at Nationwide Children’s Hospital.

The researchers performed a genetic analysis of brain tissue, blood and buccal (epithelial) cells. Tissue samples were from six patients, ages 2 months to 7 months, who underwent epilepsy surgery. The brain samples showed that some of the cells in the brain tissue (including astrocytes) had extra copies of chromosome 1q compared to the normal tissue. The blood and buccal cells did not have any cells with extra copies.

Notably, astrocytes carrying the extra 1q showed distinct gene expression signatures and histopathologic differences such as hyaline inclusions. This evidence supports the association of chromosome 1q gains with astrocytic inclusions in epilepsy.

“From a practical standpoint, in neurosurgical cases of focal epilepsy where we see certain histopathological signs, namely hyaline astrocytic inclusions, we can suspect the underlying genetic etiology is chromosome 1q gain,” says Dr. Bedrosian, who is also an assistant professor of Pediatrics at The Ohio State University College of Medicine.

But that etiology wasn’t the only finding in the study.

“The surprising finding was that the genetic alteration (chromosome 1q gains) was inherited in some of the patients, even though it was only found in a mosaic pattern within brain tissue,” Dr. Bedrosian adds. “This finding was a serendipitous observation that led us down a path to discover a novel mechanism for brain mosaicism.”

Analysis indicated that in five of the six patients, the extra chromosome copies were maternally derived – that is, they were present as a result of an error in the meiotic divisions that formed the egg. The analysis demonstrates that this error was corrected (rescued) by cell repair mechanisms during embryonic or fetal development in most tissues (blood and buccal) but not in all brain cells.

Katherine Miller, PhD, first author of the study and principal investigator in the Institute for Genomic Medicine, notes the uniqueness of the finding.

“We were able to genetically analyze blood from the mothers and then confirm that the extra chromosomal material was actually inherited, indicating a complex genetic phenomenon that resulted in the somatic mosaicism,” Dr. Miller says.

Normally, mosaicism is expected to be the result of changes to the genetic material during fetal development. However, these data demonstrate an alternate mechanism of brain chromosomal mosaicism — where the increase in copy number was inherited as the result of a meiotic error. During fetal development, these copy number gains were corrected in other cell lineages, making the copy number increase undetectable in blood and buccal cells.

“This work is incredibly exciting for two reasons,” says Dr. Ostendorf. “First, it links a recently identified cause to a pathology finding, furthering our understanding of how 1q gains cause unrelenting seizures. Second, it opens the door to new mechanisms of how brain tissue may be impacted by genetic problems differently than the rest of the body. Now, we have to reconsider how we look at genetic causes of epilepsy.”

“Recognizing a meiotic origin for mosaicism is also important for genetic counseling and risk of recurrence,” says Dr. Bedrosian. “If the chromosome gain is in additional tissues, patients may face an increased risk of cancers. Additionally, the mother’s future pregnancies might also be affected.”

Reference:
Miller KE, Rivaldi AC, Shinagawa N, Sran S, Navarro JB, Westfall JJ, Miller AR, Roberts RD, Akkari Y, Supinger R, Hester ME, Marhabaie M, Gade M, Lu J, Rodziyevska O, Bhattacharjee MB, Von Allmen GK, Yang E, Lidov HGW, Harini C, Shah MN, Leonard J, Pindrik J, Shaikhouni A, Goldman JE, Pierson CR, Thomas DL, Boué DR, Ostendorf AP, Mardis ER, Poduri A, Koboldt DC, Heinzen EL, Bedrosian TA. Post-zygotic rescue of meiotic errors causes brain mosaicism and focal epilepsy. Nature Genetics. 23 Oct. 2023 [Epub ahead of print].

About The Abigail Wexner Research Institute at Nationwide Children's Hospital
Named to the Top 10 Honor Roll on U.S. News & World Report’s 2023-24 list of “Best Children’s Hospitals,” Nationwide Children’s Hospital is one of America’s largest not-for-profit free-standing pediatric health care systems providing unique expertise in pediatric population health, behavioral health, genomics and health equity as the next frontiers in pediatric medicine, leading to best outcomes for the health of the whole child.  Integrated clinical and research programs are part of what allows Nationwide Children’s to advance its unique model of care. As home to the Department of Pediatrics of The Ohio State University College of Medicine, Nationwide Children’s faculty train the next generation of pediatricians, scientists and pediatric specialists. The Abigail Wexner Research Institute at Nationwide Children’s Hospital is one of the Top 10 National Institutes of Health-funded free-standing pediatric research facilities in the U.S., supporting basic, clinical, translational, behavioral and population health research. The AWRI is comprised of multidisciplinary Centers of Emphasis paired with advanced infrastructure supporting capabilities such as technology commercialization for discoveries; gene- and cell-based therapies; and genome sequencing and analysis. More information is available at NationwideChildrens.org/Research.

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