New Web Tool Fights Antibacterial Resistance
Technology developed by a Texas A&M School of Public Health researcher takes a decades-old experiment to the next level.
2021-06-15
(Press-News.org) In 1943, two scientists named Max Delbrück and Salvador Luria conducted an experiment to show that bacteria can mutate randomly, independent of external stimulus, such as an antibiotic that threatens a bacterial cells' survival. Today the Luria-Delbrück experiment is widely used in laboratories for a different purpose--scientists use this classic experiment to determine microbial mutation rates. When performing the Luria-Delbrück experiment, scientists need efficient computer algorithms to extract reliable estimates of mutation rates from data, and they also need well-designed software tools to access these sophisticated algorithms.
Through the years, several web tools that allow researchers to more easily input and analyze data on a computer were developed to increase efficiency and efficacy of the Luria-Delbrück experiment. However, no existing web tool allows scientists to access many recently developed algorithms that can extract even more accurate estimates of microbial mutation rates from data.
Qi Zheng, PhD, professor at the Texas A&M University School of Public Health, recently developed a new web tool called webSalvador to fill several gaps left by existing web tools. In the Microbiology Resource Announcements (MRA) Journal, Zheng explains how WebSalvador offers many desirable capabilities that are vital to bacteria mutation research, including more accurate methods for constructing confidence intervals and new methods for comparing mutation rates.
The web tool also eliminates the need for scientists to learn programming and software language, which Zheng described as an "important barrier" to using the Luria-Delbrück experiment to tackle important problems in mutation research, such as the global public health headache of bacterial drug resistance.
"Learning software languages can be challenging and time consuming for most biologists," Zheng said. "With webSalvador, biologists can input data and see results easily."
Increasing the efficiency and efficacy of the Luria-Delbrück experiment is important because it can ultimately help advance mutation research, which is vital to many branches of life sciences. Zheng cites bacterial drug resistance as one of the most important applications of the Luria-Delbrück experiment, and refers to multi-drug resistant tuberculosis as an example in which advanced mutation research is vital. He calls microbial drug resistance a "wide-spread, global health problem."
INFORMATION:
ELSE PRESS RELEASES FROM THIS DATE:
2021-06-15
Photoemission is a property of metals and other materials that emit electrons when struck by light. Electron emission after light absorption was already explained by Albert Einstein. But since this effect is a highly complex process, scientists have still not been able to fully elucidate its details. Prof. Dr. Bernd von Issendorff and his team at the University of Freiburg's Institute of Physics have now succeeded in detecting a previously unknown quantum effect in the angular distributions of photoelectrons from cryogenic mass-selected metal clusters. ...
2021-06-15
Washington, D.C. - June 15, 2021 - Viral genome sequencing of wastewater can provide an early warning system of emerging SARS-CoV-2 variants that is independent of investigations of identified clinical cases, according to a new study published in mSystems, an open-access journal of the American Society for Microbiology. In the study, researchers describe the detection and quantification of variant B.1.1.7, first identified in southeast England, in sewage samples from London, United Kingdom before widespread transmission of this variant was obvious from clinical cases.
"Wastewater sampling and environmental surveillance ...
2021-06-15
Humans can do lots of things that plants can't do. We can walk around, we can talk, we can hear and see and touch. But plants have one major advantage over humans: They can make energy directly from the sun.
That process of turning sunlight directly into usable energy - called photosynthesis - may soon be a feat humans are able to mimic to harness the sun's energy for clean, storable, efficient fuel. If so, it could open a whole new frontier of clean energy. Enough energy hits the earth in the form of sunlight in one hour to meet all human civilization's energy needs for an entire year.
Yulia Puskhar, a biophysicist and professor of physics in Purdue's College of Science, may have a way to harness that energy by mimicking plants.
Wind ...
2021-06-15
Proper chromosome segregation into two future daughter cells requires the mitotic spindle to elongate in anaphase. However, although some candidate proteins are implicated in this process, the molecular mechanism that drives spindle elongation in human cells has been unknown, until now! Researchers at the Croatian Ruđer Bošković Institute (RBI) have discovered the exact molecular mechanism of bridging microtubules sliding and its role in proper distribution of genetic material during cell division. These latest results were published in the scientific journal Developmental Cell (IF: 10.092).
Cell division is a fundamental process required for stable transmission ...
2021-06-15
WASHINGTON -- Researchers have fabricated a magnetically driven rotary microfilter that can be used to filter particles inside a microfluidic device. They made the tiny turning filter by creating a magnetic material that could be used with a very precise 3D printing technique known as two-photon polymerization.
Microfluidic devices, also known as lab-on-a-chip devices, can be used to perform multiple laboratory functions inside a chip that usually measures a few square centimeters or less. These devices contain intricate networks of microfluidic channels and are becoming more and more complex. They may be useful for a variety of applications such as screening molecules ...
2021-06-15
Antidepressants can help humans emerge from the darkness of depression. Expose crayfish to antidepressants, and they too become more outgoing -- but that might not be such a positive thing for these freshwater crustaceans, according to a new study led by scientists with the University of Florida.
"Low levels of antidepressants are found in many water bodies," said A.J. Reisinger, lead author of the study and an assistant professor in the UF/IFAS soil and water sciences department. "Because they live in the water, animals like crayfish are regularly exposed to trace amounts of these ...
2021-06-15
Pharmaceutical pollution is found in streams and rivers globally, but little is known about its effects on animals and ecosystems. A new study, published in the journal Ecosphere, investigated the effects of antidepressant pollution on crayfish. Just two weeks of citalopram exposure caused changes in crayfish behavior, with the potential to disrupt stream ecosystem processes like nutrient cycling, oxygen levels, and algal growth.
Coauthor Emma Rosi, a freshwater ecologist at Cary Institute of Ecosystem Studies, says, "Animals living in streams and rivers are exposed to a chronic mix of pharmaceutical pollution as a result of wastewater contamination. Our study explored how antidepressant levels ...
2021-06-15
New Haven, Conn. --In a new study led by Yale Cancer Center, researchers show the nucleoside transporter ENT2 may offer an unexpected path to circumventing the blood-brain barrier (BBB) and enabling targeted treatment of brain tumors with a cell-penetrating anti-DNA autoantibody. The study was published today online in the Journal of Clinical Investigation Insight.
"These findings are very encouraging as the BBB prevents most antibodies from penetrating the central nervous system and limits conventional antibody-based approaches to brain tumors," said James E. Hansen, MD, associate professor of therapeutic radiology, radiation oncology chief of the Yale Gamma Knife Center at Smilow Cancer Hospital, and corresponding author of the study.
Deoxymab-1 (DX1) ...
2021-06-15
Ethiopia, Nigeria, Colombia, Myanmar and Syria are just a handful of the places around the world currently engaged in ongoing civil wars. Even when peace agreements can be negotiated to end civil wars, maintaining stability is incredibly challenging. In these fragile post-conflict areas, a small communal dispute can easily escalate and unravel peace deals.
Peacekeepers can help contain the spread of violence and promote peaceful interactions between groups, but how? And in what situations can peacekeepers be most effective? New research from Washington University ...
2021-06-15
Changing your eating habits or altering your circadian clock can impact healthy fat tissue throughout your lifespan, according to a preclinical study published today in Nature by researchers with The University of Texas Health Science Center at Houston (UTHealth).
Healthy fat tissue helps provide energy, supports cell growth, protects organs, and keeps the body warm. A good quality diet and one that is consumed in a rhythmic manner (i.e., during our active cycle) is important in maintaining healthy fat, the researchers found.
Adipocyte progenitor cells mature into adipocytes - the healthy fat cells that make up our adipose tissue, which stores energy as fat. Researchers discovered that adipocyte progenitors undergo rhythmic daily proliferation throughout the ...
LAST 30 PRESS RELEASES:
[Press-News.org] New Web Tool Fights Antibacterial Resistance
Technology developed by a Texas A&M School of Public Health researcher takes a decades-old experiment to the next level.