FLSHclust, a new algorithm, reveals rare and previously unknown CRISPR-Cas systems
2023-11-23
Using a new algorithm called FLSHclust (“flash clust”), researchers have discovered 188 rare and previously unknown CRISPR-linked gene modules – including a novel type VII CRISPR-Cas system – among billions of protein sequences. The approach and its findings provide novel opportunities for harnessing CRISPR systems and understanding the vast functional diversity of microbial proteins. CRISPR systems have been leveraged to develop a growing suite of novel biomolecular approaches, including CRISPR/Cas-mediated genome editing. The discovery ...
Extremely energetic cosmic ray detected, but with no obvious source
2023-11-23
An extremely energetic cosmic ray – an extragalactic particle with an energy exceeding ~240 exa-electron volts (EeV) – has been detected by the Telescope Array experiment’s surface detector, researchers report. However, according to the findings, its arrival direction shows no obvious source. Ultrahigh-energy cosmic rays (UHECRs) are subatomic charged particles from space with energies greater than 1 EeV – roughly a million times as high as the energy reached by human-made particle accelerators. Although low-energy cosmic rays primarily emanate from the sun, the origins of rarer UHECRs are thought to be related to the most energetic phenomena in the Universe, ...
Telescope Array detects second highest-energy cosmic ray ever
2023-11-23
In 1991, the University of Utah Fly’s Eye experiment detected the highest-energy cosmic ray ever observed. Later dubbed the Oh-My-God particle, the cosmic ray’s energy shocked astrophysicists. Nothing in our galaxy had the power to produce it, and the particle had more energy than was theoretically possible for cosmic rays traveling to Earth from other galaxies. Simply put, the particle should not exist.
The Telescope Array has since observed more than 30 ultra-high-energy cosmic rays, though none approaching the Oh-My-God-level energy. No observations have yet revealed ...
'Dolomite Problem': 200-year-old geology mystery resolved
2023-11-23
Images // Video
ANN ARBOR—For 200 years, scientists have failed to grow a common mineral in the laboratory under the conditions believed to have formed it naturally. Now, a team of researchers from the University of Michigan and Hokkaido University in Sapporo, Japan have finally pulled it off, thanks to a new theory developed from atomic simulations.
Their success resolves a long-standing geology mystery called the "Dolomite Problem." Dolomite—a key mineral in the Dolomite mountains in Italy, Niagara Falls, the White Cliffs of Dover and Utah's Hoodoos—is very abundant in rocks older than 100 million years, but nearly absent in younger ...
AI recognizes the tempo and stages of embryonic development
2023-11-23
Animal embryos go through a series of characteristic developmental stages on their journey from a fertilized egg cell to a functional organism. This biological process is largely genetically controlled and follows a similar pattern across different animal species. Yet, there are differences in the details – between individual species and even among embryos of the same species. For example, the tempo at which individual embryonic stages are passed through can vary. Such variations in embryonic development are considered an important driver of evolution, as they can lead to new characteristics, thus promoting evolutionary adaptations and biodiversity.
Studying the embryonic ...
Potential new target and drug candidate for Barth syndrome
2023-11-23
In a Nature Metabolism paper published today, researchers from the University of Pittsburgh detail a potential new target and a small-molecule drug candidate for treating Barth syndrome, a rare, life-threatening and currently incurable genetic disease with devastating consequences.
Barth syndrome affects about 1 in every 300,000 to 400,000 babies born worldwide. Those with the condition have weak muscles and hearts and experience debilitating fatigue and recurrent infections.
Pitt researchers discovered that faulty mitochondria are at least partially to blame, and identified a molecular culprit that could be targeted to potentially reverse the disease course in the future.
In ...
New therapy can treat rare and hereditary diseases
2023-11-23
A lot of research has been done over many decades on diseases that are widespread in large parts of the population, such as cancer and heart disease. As a result, treatment methods have improved enormously thanks to long-term research efforts on diseases that affect many people.
However, there are many diseases that affect just a handful people. These diseases often fly under the radar and are far less researched. They include quite a few rare, hereditary diseases, such as DOOR syndrome, which is ...
Y-chromosome and its impact on digestive diseases
2023-11-23
A major breakthrough in human genetics has been achieved with the complete decoding of the human Y chromosome, opening up new avenues for research into digestive diseases. This milestone, along with advancements in third-generation sequencing technologies, is poised to revolutionize our understanding of the genetic underpinnings of digestive disorders and pave the way for more personalized and effective treatment strategies.
The Y chromosome, the smallest of the human chromosomes, has long been shrouded in mystery due to its complex repetitive structure. However, recent advancements in sequencing technologies have enabled researchers to unravel the intricate details of this genetic ...
Fractional COVID-19 booster vaccines produce similar immune response as full-doses
2023-11-23
Reducing the dose of a widely used COVID-19 booster vaccine produces a similar immune response in adults to a full-dose with fewer side effects, according to a new study.
The research, led by Murdoch Children's Research Institute (MCRI) and the National Centre for Communicable Diseases in Mongolia, found that a half dose of a Pfizer COVID-19 booster vaccine elicited a non-inferior immune response to a full dose in Mongolian adults who previously had AstraZeneca or Sinopharm COVID-19 shots. But it found half-dose boosting may be less effective in adults primed with the Sputnik V COVID-19 vaccine.
The research ...
Consolidator Grants: ERC unleashes €627 million in grants to fuel excellent research across Europe
2023-11-23
Iliana Ivanova, European Commissioner for Innovation, Research, Culture, Education and Youth, said: “I extend my heartfelt congratulations to all the brilliant researchers who have been selected for ERC Consolidator Grants. I'm especially thrilled to note the significant increase in the representation of women among the winners for the third consecutive year in this prestigious grant competition. This positive trend not only reflects the outstanding contributions of women researchers but also highlights the strides we are making towards a more inclusive and diverse scientific community.”
President of the European Research Council Prof. Maria Leptin said: “The new ...
A fifth higher: Tropical cyclones substantially raise the Social Cost of Carbon
2023-11-23
Extreme events like tropical cyclones have immediate impacts, but also long-term implications for societies. A new study published in the journal Nature Communications now finds: Accounting for the long-term impacts of these storms raises the global Social Cost of Carbon by more than 20 percent, compared to the estimates currently used for policy evaluations. This increase is mainly driven by the projected rise of tropical-cyclone damages to the major economies of India, USA, China, Taiwan, and Japan under global warming.
“Intense tropical cyclones have the power to slow down the economic development of a country for more than a decade, our analysis shows. With global warming, the share ...
Study reveals how shipwrecks are providing a refuge for marine life
2023-11-23
An estimated 50,000 shipwrecks can be found around the UK’s coastline and have been acting as a hidden refuge for fish, corals and other marine species in areas still open to destructive bottom towed fishing, a new study has shown.
Many of these wrecks have been lying on the seabed for well over a century, and have served as a deterrent to fishers who use bottom towed trawling to secure their catches.
As a result, while many areas of the seabed have been damaged significantly in areas of heavy fishing pressure, the ...
Pangenomic study of water caltrop — structural variations play a role in speciation and asymmetric subgenome evolution
2023-11-23
Rice, maize, and wheat provide more than half of the calories consumed by humans. The decrease in crop diversity poses a significant risk to global food security. Therefore, the utilization of orphan crops has become an effective approach to address food security crises. Nevertheless, in the face of rapid urban and rural modernization and the intensification of agricultural practices, the availability of wild and cultivated orphan crops is dwindling, with a noticeable disparity in their collection, preservation, ...
Professor Tao Jun's team at Yangzhou University analyses the molecular mechanism of PoWRKY71 in response to drought stress of Paeonia ostii
2023-11-23
Paeonia ostii is a widely grown woody crop with up to 40% α-linolenic acid in its seed oil, which is beneficial to human health. Drought is a major environmental factor limiting the popularisation of P. ostii in hilly and mountainous areas, which may affect plant growth or lead to plant death.WRKY is one of the largest families of transcription factors in plants, and plays an important role in plant response to drought stress. However, the molecular mechanism by which P. ostii WRKY transcription factors respond to drought stress is still unclear.
In September 2023, Horticulture ...
The Chinese team completed the genome assembly of Cornus wilsoniana
2023-11-23
Cornus wilsoniana (2n=22) is a common shrub in the northern temperate zone of China. It blooms white flowers in spring and produces purple-black berries in autumn. This tree has a unique mottled bark texture that makes it particularly eye-catching in winter, earning it the common name "ghost dogwood". Due to its peeling bark in winter, it is commonly known as "Guangpi tree" in China. The fruit of C. wilsoniana is rich in oil and can be used to extract edible oil. The oil content ...
Does patient-surgeon gender concordance lead to lower patient mortality? Mostly no, UCLA-led research suggests
2023-11-23
Does patient-surgeon gender concordance lead to lower patient mortality? Mostly no, UCLA-led research suggests
New research finds little evidence that post-surgical patient mortality is lower when patient and surgeon are the same gender.
While gender concordance has been shown to improve patient care in other health specialties, evidence has been limited when it comes to concordance between patient and surgeon. This study shows that gender concordance was associated with lower mortality for female patients, but higher mortality for male patients—patient mortality was the lowest for ...
Drones enabled the use of defibrillators before ambulance arrival
2023-11-23
Researchers at Karolinska Institutet have evaluated the possibility of alerting drones equipped with automated external defibrillators (AED) to patients with suspected cardiac arrest. In more than half of the cases, the drones were ahead of the ambulance by an average of three minutes. In cases where the patient was in cardiac arrest, the drone-delivered defibrillator was used in a majority of cases. The results have been published in the journal The Lancet Digital Health.
"The use of an AED is the single most important factor in saving lives. We have been deploying drones equipped with AED since the summer ...
Death rates after surgery similar regardless of patient-surgeon gender match
2023-11-23
Death rates after major surgery are similar regardless of whether a male or female surgeon operates on a male or female patient, finds a large US study published by The BMJ today.
The differences seen were small and not clinically meaningful and the researchers say their findings should help improve processes and patterns of care for all patients.
Gender concordance between patients and physicians (when the physician and patient are of the same sex) is generally linked to higher quality care processes and improved patient outcomes through more effective ...
COVID vaccination before infection strongly linked to reduced risk of developing long covid
2023-11-23
Receiving at least one dose of a covid-19 vaccine before the first infection is strongly associated with a reduced risk of developing post-covid-19 condition, commonly known as long covid, finds a study published by The BMJ today.
The findings, based on data for more than half a million Swedish adults, show that unvaccinated individuals were almost four times as likely to be diagnosed with long covid than those who were vaccinated before first infection.
The researchers stress that causality ...
Iron infusion before bowel surgery reduces need for blood transfusion
2023-11-23
Change in clinical practice would have clear benefits for patients undergoing major bowel surgery, according to analysis conducted by researchers from UCL and the Royal Devon and Exeter Hospital.
The study, published in The British Journal of Surgery, provides evidence that giving iron intravenously before colorectal surgery improves outcomes for patients, reducing the need for blood transfusion by 33%.
Anaemia is a common problem in patients undergoing bowel surgery due to bleeding from the gut and blood loss during the operation. Anaemia is also associated ...
The first report on telomere-to-telomere gap-free reference genome of wild blueberry (Vaccinium duclouxii)
2023-11-23
Blueberry, a common Vaccinium species with small-sized berries, is known for its delicious taste, balanced sweetness and acidity, and rich nutritional content. It is abundant in various vitamins and antioxidants. However, the limited genetic resources for cultivated blueberries have significantly hindered their development and utilization. Therefore, utilizing wild blueberries' genetic resources for breeding is paramount to enhancing the resilience and quality of cultivated varieties.
Vaccinium duclouxii, native to the southwestern region of China, is an endemic wild blueberry ...
Chinese-Russian cooperation has strengthened significantly in the past 30 years, analysis shows
2023-11-22
Chinese and Russian cooperation has grown significantly in the past three decades thanks to joint work on energy trade, politics and official visits, analysis shows.
There was a ‘limited’ Sino–Russian cooperation intensity in 1992–1995, which grew from then until 2007 and then rose. The bilateral relationship grew progressively, with no exponential growth or peaks, according to the study.
There were no or dramatic changes following Russia’s 2014 annexation of Crimea.
The ...
Researchers develop new method for prenatal genetic testing
2023-11-22
A team of investigators from Massachusetts General Hospital (MGH), Brigham and Women’s Hospital (BWH), and the Broad Institute of MIT and Harvard have developed a non-invasive genetic test that can screen the blood of pregnant individuals to survey all genes for fetal DNA sequence variants. The team evaluated the test by examining blood samples from 51 pregnant persons, finding that the test was able to capture variants that were inherited from the mother as well as new variants that were not present in the mother and associated with prenatal diagnoses. ...
Genetic predisposition to early breast cancer in Kazakh women
2023-11-22
“Our study may reveal previously uncharacterized population-specific variants that may increase the risk of BC in the Kazakh population.”
BUFFALO, NY- November 22, 2023 – A new research paper was published in Oncotarget's Volume 14 on October 4, 2023, entitled, “Determination of genetic predisposition to early breast cancer in women of Kazakh ethnicity.”
Breast cancer (BC) is the most common type of cancer among women in Kazakhstan. To date, little data are available on the spectrum of genetic variation in Kazakh women with BC.
In this new study, researchers Gulnur Zhunussova, Nazgul Omarbayeva, ...
Mitochondria-targeting antibiotics extend lifespan in C. elegans
2023-11-22
“Our ultimate goal is to find existing FDA-approved drugs and dietary supplements that can not only increase lifespan but also improve healthspan.”
BUFFALO, NY- November 22, 2023 – A new research paper was published in Aging (listed by MEDLINE/PubMed as "Aging (Albany NY)" and "Aging-US" by Web of Science) Volume 15, Issue 21, entitled, “Antibiotics that target mitochondria extend lifespan in C. elegans.”
Aging is a continuous degenerative process caused by a progressive decline of cell and tissue functions in an organism. It is induced by the accumulation of damage that affects normal cellular processes, ...
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