Microorganisms possess natural product biosynthetic gene clusters (BGCs) that may harbor unique bioactivities for use in drug development and agricultural applications. However, many uncharacterized microbial BGCs remain inaccessible. Researchers at University of Illinois Urbana-Champaign previously demonstrated a technique using transcription factor decoys to activate large, silent BGCs in bacteria to aid in natural product discovery. Now, they have developed a direct cloning method that aims to accelerate large-scale discovery of novel natural products. Their findings are reported in the journal Nature Communications. Named Cas12a assisted precise targeted cloning using in vivo Cre-lox recombination (CAPTURE), ...

DURHAM, N.C. -- Duke researchers have been studying something that happens too slowly for our eyes to see. A team in biologist Philip Benfey's lab wanted to see how plant roots burrow into the soil. So they set up a camera on rice seeds sprouting in clear gel, taking a new picture every 15 minutes for several days after germination. When they played their footage back at 15 frames per second, compressing 100 hours of growth into less than a minute, they saw that rice roots use a trick to gain their first foothold in the soil: their growing tips make ...

A chemist from RUDN University, working with a group of colleagues, synthesized three new chalcogenides (compounds that contain metals and elements from group 16 of the periodic table). The team suggested an unusual approach to synthesis that was based on iodine. An article about the work was published in the Dalton Transactions journal. Chalcogens are elements of group 16 of the periodic table that include oxygen, sulfur, selenium, tellurium, polonium, and livermorium--an artificial radioactive element. Chalcogenides are compounds of chalcogens with metals that are used as photosensitive ...

Several University of Illinois Chicago faculty members have addressed the issue of how to ethically conduct research with Black populations. In their paper "Ethics of Research at the Intersection of COVID-19 and Black Lives Matter: A Call to Action," authors Natasha Crooks, an assistant professor, Phoenix Matthews, a professor, both of the UIC College of Nursing, and Geri Donenberg, director of the Center for Dissemination and Implementation Science at the UIC College of Medicine, highlight the historical issues that impact research involving Black populations. They also provide recommendations for researchers to ethically engage Black populations in research. ...

Biotechnologists from RUDN University in collaboration with Lomonosov MSU and Kurchatov institute made an important contribution to the technology of phosphate and nitrate biocapture from wastewater using Lobosphaera algae fixed on the filters.The biomass obtained in the course of this process can be used as a fertilizer. The results of the study were published in the Journal of Water Process Engineering. Phosphates and nitrates get to the wastewater together with industrial and household waste, especially detergents. Both substances are parts of phosphorus and nitrogen chemical cycles. However, these cycles are disturbed by human activity, as the growing amounts of phosphates and nitrates cannot be processed by water ecosystems. As a result, these substances turn from useful nutrients ...

New Orleans, LA - A retrospective study conducted by LSU Health New Orleans reports that contrary to previous research, most patients who drop out of peritoneal dialysis may do so for psychosocial reasons. The findings are published in The American Journal of the Medical Sciences, available here. The paper inspired a companion editorial, available here. The research team evaluated the reasons that 27 of the 83 patients enrolled in the peritoneal dialysis program withdrew between 2016 and 2018. Twenty-four or 86% were African American. They found that psychosocial factors, including mental health illness such as anxiety and depression, loss of support networks, or inability to tolerate ...

Since Charles Darwin's day, the abundance of life on coral reefs has been puzzling, given that most oceanic surface waters in the tropics are low in nutrients and unproductive. But now research, led by Newcastle University and published in in the journal Science Advances, has confirmed that the food web of a coral reef in the Maldives relies heavily on what comes in from the open ocean. The team found that these offshore resources contribute to more than 70% of reef predator diets, the rest being derived from reef associated sources. Led by Dr Christina Skinner, now based at the Hong Kong University of Science and Technology, the researchers included collaborators from Woods Hole Oceanographic Institution (USA), Banyan Tree Marine ...

Cooperative operations between a solar observation satellite and a sounding-rocket telescope have measured the magnetic field strength in the photosphere and chromosphere above an active solar plage region. This is the first time that the magnetic field in the chromosphere has been charted all the way up to its top. This finding brings us closer to understanding how energy is transferred between layers of the Sun. Despite being the brightest object in the sky, the Sun still holds many mysteries for astronomers. It is generally believed that magnetic fields play an important role in heating the solar corona, but the details of the process are still unclear. To solve this mystery it is important to understand the magnetic field in the chromosphere, which is sandwiched ...

Northwestern University synthetic biologist Joshua Leonard used to build devices when he was a child using electronic kits. Now he and his team have developed a design-driven process that uses parts from a very different kind of toolkit to build complex genetic circuits for cellular engineering. One of the most exciting frontiers in medicine is the use of living cells as therapies. Using this approach to treat cancer, for example, many patients have been cured of previously untreatable disease. These advances employ the approaches of synthetic biology, a growing ...

Every day space telescopes provide spectacular images of the solar activity. However, their instruments are blind to its main driver: the magnetic field in the outer layers of the solar atmosphere, where the explosive events that occasionally affect the Earth occur. The extraordinary observations of the polarization of the Sun's ultraviolet light achieved by the CLASP2 mission have made it possible to map the magnetic field throughout the entire solar atmosphere, from the photosphere until the base of the extremely hot corona. This investigation, published today in the journal Science Advances, has been carried out by the international team responsible for this suborbital experiment, which includes several scientists of the POLMAG group of the Instituto de Astrofísica de Canarias ...

Disorders of the cells' energy supply can cause a number of serious diseases, but also seem to be connected to ageing. More research is needed on mitochondrial function to find future treatments. A new study involving researchers at Karolinska Institutet shows how an important molecule inside the mitochondria affects their function in mice and fruit flies. The study, which is published in Science Advances, adds valuable knowledge on formerly relatively unexplored protein modifications. In each cell of the body is an organ called the mitochondrion, which converts nutrients in our food to energy. Mitochondria are an essential part of the ...

A combination of robust vaccination programmes and strict physical distancing rules could avoid recurring peaks of COVID-19 without the need to rely on stay-at-home restrictions, according to a new study by epidemiologists and demographers from WorldPop at the University of Southampton, in collaboration with The Chinese University of Hong Kong. This research used anonymised mobile phone geolocation data with epidemiological and coronavirus case data from China to model the potential impact of vaccination and physical distancing on virus transmission. They predicted the effect of different combinations of interventions on low, medium and high density cities in the country. The ...

A new study published in The British Medical Journal by researchers including SFU health sciences professor Scott Lear found consuming a high number of refined grains, such as croissants and white bread, is associated with a higher risk of major cardiovascular disease, stroke and death. The Prospective Urban Rural Epidemiology (PURE) study has been examining diets from diverse populations in low-, middle- and high-income countries around the world. Over 16 years of analysis of 137,130 participants in 21 countries, including Canada, the researchers found the intake of refined grains and added sugars have greatly increased over the years. Grains were categorized into three groups: refined grains, whole ...

Scientists have discovered the first evidence of protein folding driven by liquid-liquid phase separation, a phenomenon in which fluids form into microscopic droplets and separate inside cells -- like drops of oil in water. In a study published in the journal Chemical Science, researchers at the University of Notre Dame found that elevated concentrations of proteins within the droplets triggered a folding event, increasing the potential for protein aggregation -- or misfolding -- which has been linked to neurological diseases including Alzheimer's disease and amyotrophic lateral sclerosis (ALS). "These particular proteins are intrinsically disordered -- they have no well-defined ...

In African Americans, the genetic risk landscape for inflammatory bowel disease (IBD) is very different from that of people with European ancestry, according to results of the first whole-genome study of IBD in African Americans. The authors say that future clinical research on IBD needs to take ancestry into account. Findings of the multi-center study, which analyzed the whole genomes of more than 1,700 affected individuals with Crohn's disease and ulcerative colitis and more than 1,600 controls, were published on February 17 in the American Journal of Human Genetics. As ...

In a new Review, P.J. Klasse and colleagues present an extensive overview of the immunogenicity profiles of several leading SARS-CoV-2 vaccine candidates, including several developed under the auspices of the U.S. Government's "Operation Warp Speed" program, as well as leading candidates from China and Russia. Since the paper was submitted, two of these vaccines - from Pfizer/BioNTech and Moderna - have been authorized for use by the FDA. The authors review data from evaluations in non-human primates as well as human clinical trials, summarizing what is known about antibody and T cell immunogenicity for roughly a dozen leading candidates. Noting the variability in ...

Even in the world of the smallest particles with their own special rules, things cannot proceed infinitely fast. Physicists at the University of Bonn have now shown what the speed limit is for complex quantum operations. The study also involved scientists from MIT, the universities of Hamburg, Cologne and Padua, and the Jülich Research Center. The results are important for the realization of quantum computers, among other things. They are published in the prestigious journal Physical Review X, and covered by the Physics Magazine of the American Physical Society. Suppose ...

Exploratory analyses including 17,178 participants find that higher vaccine efficacy is obtained with a longer interval between the first and second standard dose (81% for 3-month interval vs 55% for up to 6-week interval). In addition, a single dose of vaccine is highly efficacious in the first 3 months (76% efficacy from 22 days after vaccination onwards). The study also includes updated estimates of overall vaccine efficacy against symptomatic disease for two standard doses, which confirm that the vaccine is effective. There were no hospitalisations or deaths among those receiving ...

The battle against late-stage prostate cancer might have found a potential new strategy to combat this deadly disease. Research led by Baylor College of Medicine reveals in the Journal of Clinical Investigation that the enzyme MAPK4 concertedly activates androgen receptor (AR) and AKT, molecules at the core of two cellular signaling pathways known to promote prostate cancer growth and resistance to standard therapy. Importantly, inhibiting MAPK4 simultaneously inactivated both AR and AKT and stopped cancer growth in animal models. The findings open the possibility that targeting MAPK4 in human prostate cancer might provide a novel therapeutic strategy for this ...

The results, recently published in the journal Communications Biology, have important applications in the field of coevolutionary biology The physical movement of species determines their potential scope to leave their primary ecosystem behind in the quest for new niches in which to survive or reproduce--a decisive factor for the processes that determine their genomic characteristics. Researchers from the University of Granada (UGR) and the University of Illinois (UI) have, for the first time, analysed the relationship between this potential for movement in different species of parasites--their dispersal capacity--and their levels of genetic introgression. Introgression--the gradual movement of genes from one species into the gene pool of another--affects the proportion of regions of ...

A new study, in which the Andalusian Earth Sciences Institute (IACT) (CSIC-UGR) participated, has described for the first time a key stage in the beginning of the great glaciations and indicates that it can happen to our planet in the future. The findings were recently published in the scientific journal Nature The study claims to have found a new connection that could explain the beginning of the ice ages on Earth Antarctic iceberg melt could hold the key to the activation of a series of mechanisms that cause the Earth to suffer prolonged periods of global ...

The mating process is one of the most important mechanisms for maintaining genetic variation in natural populations. The emergence of sexual reproduction turned out to be the most important evolutionary innovation that facilitated the evolution of eukaryotes. Paramecium is a well-known genus of ciliated protists with a complex system of 'sexes', or mating types. Paramecium reproduces asexually, by binary fission, which is not related to the mating process. During conjugation, Paramecium of compatible mating types exchange haploid nuclei, equivalent to gametes. The nuclei of each organism ...

LOUISVILLE, Ky. - The SARS-CoV-2 pandemic has caused tremendous upheaval, leading to more than 2.3 million deaths worldwide and 465,000 in the United States. Understanding the impact of seasonal temperature changes on transmission of the virus is an important factor in reducing the virus's spread in the years to come. SARS-CoV-2 belongs to a large family of human coronaviruses, most of which are characterized by increased transmission in cooler, less humid months and decreased transmission in warmer, more humid months. With this understanding, researchers at the University of Louisville's Christina ...

HSE University researchers Yuri Markov and Natalia Tyurina discovered that when people visually estimate the size of objects, they are also able to consider their distance from the observer, even if there are many such objects. The observers rely not only on the objects' retinal representation, but also on the surrounding context. The paper was published in the journal Acta Psychologica. Multiple studies in visual 'ensemble statistics' have proven that humans are able to visually estimate the statistical characteristics of multiple objects in a fast and rather ...

ROCHESTER, Minn. ? Researchers at Mayo Clinic have combined results from a functional test measuring the effect of inherited variants in the BRCA2 breast and ovarian cancer gene with clinical information from women who received genetic testing to determine the clinical importance of many BRCA2 variants of uncertain significance (VUS). The findings were published today in a study in the American Journal of Human Genetics. "There are 4,565 different VUS in the BRCA2 gene listed in the National Institutes for Health (NIH) Clinical Variant Database," says Fergus Couch, Ph.D., a breast cancer researcher at ...