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Gene regulatory network inference based on causal discovery integrating with graph neural network

Gene regulatory network inference based on causal discovery integrating with graph neural network
2024-02-23
Gene regulatory networks (GRNs) depict the regulatory mechanisms of genes within cellular systems as a network, offering vital insights for understanding cell processes and molecular interactions that determine cellular phenotypes. Transcriptional regulation, a prevalent type for regulating gene expression, involves the control of target genes (TGs) by transcription factors (TFs). One of the major challenges in inferring GRNs is to establish causal relationships, rather than just correlation, among the various components ...

Alignment efficient image-sentence retrieval considering transferable cross-modal representation learning

Alignment efficient image-sentence retrieval considering transferable cross-modal representation learning
2024-02-23
Image-sentence retrieval task aims to search images for given sentences and retrieve sentences from image queries. The current retrieval methods are all supervised methods that require a large number of annotations for training. However, considering the labor cost, it is difficult to re-align large amounts of multimodal data in many applications (e.g., medical retrieval), which results in unsupervised multimodal data. To solve the problem, a research team led by Yang YANG published their new research on 15 Feb 2024 in Frontiers of Computer Science co-published by Higher Education Press and ...

A novel deep learning modeling approach guided by mesoscience—MGDL

A novel deep learning modeling approach guided by mesoscience—MGDL
2024-02-23
Deep learning modeling that incorporates physical knowledge is currently a hot topic, and a number of excellent techniques have emerged. The most well-known one is the physics-informed neural networks (PINNs). PINN integrates the residuals of the system’s governing partial differential equations (PDEs) and the initial value/boundary conditions into the loss function, thus the resulting model satisfies the constraints of the physical laws represented by the PDEs. However, PINN cannot work if equations among the key physical quantities of the system have not been established. To ...

Improving social symptoms of depression with a common anesthetic

Improving social symptoms of depression with a common anesthetic
2024-02-23
Osaka, Japan – Well-being is important for everyone, especially when we feel lonely or isolated. Depression is a serious challenge for many people and finding an effective solution is key. In a recent study published in Molecular Psychiatry, researchers from Osaka University used a mouse model of depression to reveal that one form of ketamine (a common anesthetic) in low doses can improve social impairments by restoring functioning in a specific brain region called the anterior insular cortex. Ketamine is often used at low doses to treat depression, but its actions in the brain remain relatively unclear. Generally, ketamine refers to a mix of two different forms of ketamine: ...

Killer instinct drove evolution of mammals’ predatory ancestors

Killer instinct drove evolution of mammals’ predatory ancestors
2024-02-23
The evolutionary success of the first large predators on land was driven by their need to improve as killers, researchers at the University of Bristol and the Open University suggest. The forerunners of mammals ruled the Earth for about 60 million years, long before the origin of the first dinosaurs. They diversified as the top predators on land between 315–251 million years ago. Researchers studied the jaw anatomy and body size of carnivorous synapsids, using these traits to reconstruct the likely feeding habits of these ancient predators and chart their ecological ...

Diversifying data to beat bias

2024-02-23
AI holds the potential to revolutionize healthcare, but it also brings with it a significant challenge: bias. For instance, a dermatologist might use an AI-driven system to help identify suspicious moles. But what if the machine learning model was trained primarily on image data from lighter skin tones, and misses a common form of skin cancer on a darker-skinned patient?   This is a real-world problem. In 2021, researchers found that free image databases that could be used to train AI systems to diagnose skin cancer contain very few images ...

Increased use of Paxlovid could cut hospitalizations, deaths and costs

Increased use of Paxlovid could cut hospitalizations, deaths and costs
2024-02-23
Increased use of Paxlovid, the antiviral drug used to treat COVID-19, could prevent hundreds of thousands of hospitalizations and save tens of billions of dollars a year, according to a new epidemiological model published by researchers at The University of Texas at Austin. In fact, epidemiologists found that treating even 20% of symptomatic cases would save lives and improve public health. A 2023 National Institutes of Health study found that only about 15% of high-risk patients take Paxlovid when infected with COVID-19. Using a multiscale mathematical model based on ...

How to build your own robot friend: Making AI education more accessible

How to build your own robot friend: Making AI education more accessible
2024-02-23
From smart virtual assistants and self-driving cars to digital health and fraud prevention systems, AI technology is transforming almost every aspect of our daily lives—and education is no different. For all its promise, the rise of AI, like any new technology, raises some pressing ethical and equity questions. How can we ensure that such a powerful tool can be accessed by all students regardless of background?  Inspired by this call to action, USC researchers have created a low-cost, accessible learning kit to help college and high school students build their own “robot friend.” Students can personalize the robot’s ...

Advances and future development of automated insulin delivery systems

Advances and future development of automated insulin delivery systems
2024-02-23
  A special 13-article supplement to the peer-reviewed journal Diabetes Technology & Therapeutics (DTT) examines the “Development and Future of Automated Insulin Delivery (AID) Systems. Click here to read the supplement now. Included in the supplement is the article titled “A Peek Under the Hood: Explaining the MiniMed™ 780G Algorithm with Meal Detection™ Technology", by Benyamin Grosman, PhD and his Medtronic algorithm team with co-authors Ohad Cohen, MD, and Robert Vigersky, MD, Chief Medical Officer at Medtronic. James Thrasher, MD “Early ...

Strategic grazing could boost conservation of ‘near-threatened’ sage-grouse

Strategic grazing could boost conservation of ‘near-threatened’ sage-grouse
2024-02-23
RENO, Nev. – A multi-agency study, spearheaded by researchers from the University of Nevada, Reno’s College of Agriculture, Biotechnology & Natural Resources and the U.S. Department of Agriculture, underscores the impacts of strategic cattle grazing, particularly on restoring the declining population of the greater sage-grouse bird, a keystone species in the Great Basin region.   Amidst ongoing decline, the U.S. Fish and Wildlife Service acted by listing the sage-grouse for protection under the Endangered Species Act in 2011. This move prompted the Bureau of Land Management to develop a federal conservation plan for the species ...

Complement system response to AAV vector gene therapy

Complement system response to AAV vector gene therapy
2024-02-23
Recent clinical trials utilizing high doses of adeno-associated virus (AAV) vectors have highlighted a new challenge to AAV gene transfer – activation of the complement system. A new article in the peer-reviewed journal Human Gene Therapy describes how a convergence of AAV-specific, environmental, and patient-specific factors shaping complement responses likely contribute to differential outcomes seen in clinical trials. Click here to read the article now. Complement responses may contribute to priming of the adaptive immune system or serious adverse events ...

Study suggests people in urban areas with more green space have better mental health

2024-02-23
By Ann Kellett, Texas A&M University School of Public Health A new study from the Texas A&M University School of Public Health suggests that city dwellers who have more exposure to urban green spaces require fewer mental health services. The study, published in the International Journal of Environmental Research and Public Health, was conducted by Jay Maddock, Ph.D., Regents Professor of environmental and occupational health at Texas A&M, and colleagues from the Center ...

Zinc discovery holds promise for people with cystic fibrosis

2024-02-23
University of Queensland researchers have identified an opportunity to reduce infections in people living with cystic fibrosis. Professor Matt Sweet, Dr Kaustav Das Gupta and Dr James Curson from UQ’s Institute for Molecular Bioscience have discovered a fault in the bacteria-killing function of immune cells in people with CF and a potential way to get around it. CF is a chronic disease in which defects in the CFTR (cystic fibrosis transmembrane conductance regulator) channel cause a build-up of mucus in the lungs, airways and digestive system, leading to ...

Study finds black children in UK at four times greater risk of complications following emergency appendicitis surgery compared with white children

2024-02-23
New research published in Anaesthesia (the journal of the Association of Anaesthetists) shows that for children undergoing emergency surgery for appendicitis in the UK, black children had a four times greater risk of postoperative complications compared with white children. The study was led by Dr Amaki Sogbodjor, from Great Ormond Street Hospital and University College London (UCL), and Professor Ramani Moonesinghe, UCL Division of Surgery and Interventional Science, London, UK and Director, Central London National ...

Webb finds evidence for neutron star at heart of young supernova remnant

Webb finds evidence for neutron star at heart of young supernova remnant
2024-02-22
NASA’s James Webb Space Telescope has found the best evidence yet for emission from a neutron star at the site of a recently observed supernova. The supernova, known as SN 1987A, was a core-collapse supernova, meaning the compacted remains at its core formed either a neutron star or a black hole. Evidence for such a compact object has long been sought, and while indirect evidence for the presence of a neutron star has previously been found, this is the first time that the effects of high-energy ...

Study finds guided parent-child discussions are effective at addressing subtle racism

2024-02-22
Study finds guided parent-child discussions are effective at addressing subtle racism When parents discuss racism with their children, negative biases toward Black people are significantly reduced in both parent and child EVANSTON, Ill. --- Experts have long pointed out the need for white parents to have conversations that directly address racism with their children to reduce racial bias. But many parents fail to have these crucial discussions. Psychology researchers at Northwestern University have published ...

Entrepreneurs’ stock losses bruise their businesses

2024-02-22
When a recession takes a bite out of an entrepreneur’s personal stock portfolio, does that person’s business suffer more than those of older and larger competitors?  New research by Marius Ring, assistant professor of finance at Texas McCombs, finds a link between the wealth of small-business owners and the health of their companies during economic downturns. When their stock portfolios lose value, their businesses suffer ripple effects: less financing and curtailed hiring.  “Entrepreneurial wealth follows the ups and downs of economic cycles,” Ring says. “I show that for entrepreneurs whose stock portfolios take a hit, their businesses ...

Copies of antibiotic resistance genes greatly elevated in humans and livestock

2024-02-22
DURHAM, N.C. – Biomedical engineers at Duke University have uncovered a key link between the spread of antibiotic resistance genes and the evolution of resistance to new drugs in certain pathogens. The research shows bacteria exposed to higher levels of antibiotics often harbor multiple identical copies of protective antibiotic resistance genes. These duplicated resistance genes are often linked to “jumping genes” called transposons that can move from strain to strain. Not only does this provide a mechanism for resistance to spread, having multiple copies of a resistance ...

Study shows how local fishers respond to climate challenges

Study shows how local fishers respond to climate challenges
2024-02-22
BEAUFORT, N.C. – When it comes to protecting a crucial resource in the face of changing conditions, it’s important to know how the humans reliant on that resource have organized themselves. Especially if there isn’t a lot of government supervision. A new study of small-scale fisheries in Mexico’s Gulf of California has found that the fishers’ response to a changing climate can be strongly influenced by what they fish for and how they’re organized. The work appears in the January 2024 issue of Global Environmental Change. “When we ...

Cooler, wetter parts of Pacific Northwest likely to see more fires, new simulations predict

Cooler, wetter parts of Pacific Northwest likely to see more fires, new simulations predict
2024-02-22
CORVALLIS, Ore. – Forests in the coolest, wettest parts of the western Pacific Northwest are likely to see the biggest increases in burn probability, fire size and number of blazes as the climate continues to get warmer and drier, according to new modeling led by an Oregon State University scientist. Understanding how fire regimes may change under future climate scenarios is critical for developing adaptation strategies, said the study’s lead author, Alex Dye. Findings were published today in JGR Biogeosciences. Dye, ...

U.S. Department of Energy awards Argonne National Laboratory $4 million for energy-efficient microchip research

U.S. Department of Energy awards Argonne National Laboratory $4 million for energy-efficient microchip research
2024-02-22
While the microchips inside electronic devices like cell phones and computers are incredibly small, transistors — the tiny electrical switches inside of microchips — are approaching the atomic level. Today’s microchips pack over 100 million transistors in an area the size of a pin head. Despite their almost unimaginable size, the total number of such microelectronic devices consume an enormous amount of energy, which is growing exponentially. Predictions indicate that 20% of the world’s energy could be consumed ...

Less invasive early lung cancer study receives Top 10 Clinical Research Achievement Award

2024-02-22
A Weill Cornell Medicine-led research team has been awarded a 2024 Top 10 Clinical Research Achievement Award from the Clinical Research Forum in recognition of an influential 2023 New England Journal of Medicine study on early-stage lung cancer resection. The award is one of 10 given annually by the Clinical Research Forum for highly innovative and clinically translatable research with the potential to provide major benefits to patients. The Washington, D.C.-based organization is an influential advocate for government funding of clinical research and the interests of American clinical research institutions generally. The winners will present their award-winning ...

Releasing “brakes” in the brain

Releasing “brakes” in the brain
2024-02-22
When certain connections in the brain do not function correctly, disorders such as Parkinson’s disease, dystonia, obsessive-compulsive disorder (OCD), and Tourette’s syndrome may result. Targeted stimulation of specific areas in the brain can help alleviate symptoms. To pinpoint the exact therapeutic target areas of the brain, a team led by researchers from Charité – Universitätsmedizin and Brigham and Women’s Hospital analyzed data from patients across the globe who had undergone implantation of tiny electrodes to stimulate ...

JMIR Publications celebrates 25 years of publishing health research

JMIR Publications celebrates 25 years of publishing health research
2024-02-22
Join Gunther Eysenbach, the founder, CEO, and executive editor of JMIR Publications, in this new video as he reflects on the company's 25th anniversary and its remarkable journey in the scholarly publishing industry. Eysenbach discusses the inception of the Journal of Medical Internet Research and the driving forces behind creating an open access eHealth journal. He emphasizes the significance of innovation both in content and form, highlighting the company's early adoption of internet-based technologies ...

How discrimination, class, and gender intersect to affect Black Americans’ well-being

How discrimination, class, and gender intersect to affect Black Americans’ well-being
2024-02-22
URBANA, Ill. – Black Americans experience racial discrimination as a chronic stressor that influences their quality of life. But it exists in conjunction with other social factors that may modify the impact in various ways. A new study from the University of Illinois Urbana-Champaign explores how discrimination, gender, and social class affect individual well-being and relationship quality for Black Americans. “It’s well documented that discrimination negatively impacts individual quality of life, but research on how it affects relationships is mixed. Some studies find it has a negative effect, others that it has no effect, and some even find a positive effect, ...
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