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New methods detect subtleties in human genomes' repetitive landscapes

New methods detect subtleties in human genomes repetitive landscapes
2010-10-28
Scientists have invented methods to scout the human genome's repetitive landscapes, where DNA sequences are highly identical and heavily duplicated. These advances, as reported today in Science, can identify subtle but important differences among people in the number and content of repeated DNA segments. These copy number variations partly account for the normal diversity among people. Copy number variations might also be why some people, and not others, have certain disorders or disease susceptibilities, and might also determine how severely they are affected. Until ...

Certain cancer therapies' success depends on presence of immune cell, Stanford study shows in mice

2010-10-28
STANFORD, Calif. — The immune system may play a critical role in ensuring the success of certain types of cancer therapies, according to a new study by researchers at the Stanford University School of Medicine. The research showed treatments that disable cancer-promoting genes called oncogenes are much more successful in eradicating tumors in the presence of a signaling molecule secreted by kind of immune cell called a T helper cell. The finding is important because many drugs now in use in humans are often tested in lab animals with weakened immune systems and many human ...

Controlling individual cortical nerve cells by human thought

Controlling individual cortical nerve cells by human thought
2010-10-28
PASADENA, Calif.—Five years ago, neuroscientist Christof Koch of the California Institute of Technology (Caltech), neurosurgeon Itzhak Fried of UCLA, and their colleagues discovered that a single neuron in the human brain can function much like a sophisticated computer and recognize people, landmarks, and objects, suggesting that a consistent and explicit code may help transform complex visual representations into long-term and more abstract memories. Now Koch and Fried, along with former Caltech graduate student and current postdoctoral fellow Moran Cerf, have found ...

Revising the timeline for deadly pancreatic cancer

2010-10-28
Pancreatic tumors are one of the most lethal cancers, with fewer than five percent of patients surviving five years after diagnosis. But a new study that peers deeply into the genetics of pancreatic cancer presents a bit of good news: an opportunity for early diagnosis. In contrast to earlier predictions, many pancreatic tumors are, in fact, slow growing, taking nearly 20 years to become lethal after the first genetic perturbations appear. "There have been two competing theories explaining why pancreatic cancers are so lethal," says Bert Vogelstein, the Howard Hughes ...

1000 Genomes Project publishes analysis of completed pilot phase

2010-10-28
Small genetic differences between individuals help explain why some people have a higher risk than others for developing illnesses such as diabetes or cancer. Today in the journal Nature, the 1000 Genomes Project, an international public-private consortium, published the most comprehensive map of these genetic differences, called variations, estimated to contain approximately 95 percent of the genetic variation of any person on Earth. Researchers produced the map using next-generation DNA sequencing technologies to systematically characterize human genetic variation ...

Large-scale fish farm production offsets environmental gains

2010-10-28
VICTORIA – Industrial-scale aquaculture production magnifies environmental degradation, according to the first global assessment of the effects of marine finfish aquaculture (e.g. salmon, cod, turbot and grouper) released today. This is true even when farming operations implement the best current marine fish farming practices. Dr. John Volpe and his team at the University of Victoria developed the Global Aquaculture Performance Index (GAPI), an unprecedented system for objectively measuring the environmental performance of fish farming. "Scale is critical," said Dr. ...

Spiral galaxies stripped bare

Spiral galaxies stripped bare
2010-10-28
HAWK-I [1] is one of the newest and most powerful cameras on ESO's Very Large Telescope (VLT). It is sensitive to infrared light, which means that much of the obscuring dust in the galaxies' spiral arms becomes transparent to its detectors. Compared to the earlier, and still much-used, VLT infrared camera ISAAC, HAWK-I has sixteen times as many pixels to cover a much larger area of sky in one shot and, by using newer technology than ISAAC, it has a greater sensitivity to faint infrared radiation [2]. Because HAWK-I can study galaxies stripped bare of the confusing effects ...

Singapore scientist leads team to discover origin of brain immune cells

2010-10-28
A team of international scientists led by Dr Florent Ginhoux of the Singapore Immunology Network (SIgN) of Singapore's Agency of Science, Technology and Research (A*STAR), have made a breakthrough that could lead to a better understanding of many neurodegenerative and inflammatory brain disorders. Their work, published in top scientific journal Science, uncovered the origins of microglia, which are white blood cells specific to the brain, and showed that, in mice, microglia had a completely different origin than other white blood cells. This understanding may lead to the ...

Narcotics and diagnostics overused in treatment of chronic neck pain

2010-10-28
Duke University and University of North Carolina (UNC) researchers report in the November issue of Arthritis Care & Research that narcotics and diagnostic testing are overused in treating chronic neck pain. Their findings indicate clinicians may overlook more effective treatments for neck pain, such as therapeutic exercise. According to reviews cited in the study, evidence to support the effectiveness of therapeutic exercise in treating chronic neck pain is good, yet only 53% of subjects were prescribed such exercise. This information was based upon reported data from a ...

Learning the truth not effective in battling rumors about NYC mosque, study finds

2010-10-28
COLUMBUS, Ohio – Evidence is no match against the belief in false rumors concerning the proposed Islamic cultural center and mosque near Ground Zero in New York City, a new study finds. Researchers at Ohio State University found that fewer than one-third of people who had previously heard and believed one of the many rumors about the proposed center changed their minds after reading overwhelming evidence rejecting the rumor. The false rumor that researchers used in the study was that Feisal Abdul Rauf, the Imam backing the proposed Islamic cultural center and mosque, ...

Victims of child abuse present higher rates of post-traumatic stress disorder

2010-10-28
In cases of child sexual abuse, there are children and teenagers that blame themselves (for example, after the thought that the abuse was led by them) or their family (thinking that their family should have protected them) for the abuse suffered in their childhood. This type of victims resort more frequently to avoidance coping. Thus, they try to sleep more than usual, avoid thinking on the problem, or resort to alcohol and drug abuse –in the case of teenagers. This behaviour leaves important psychological after-effects on victims: concretely, they present more symptoms ...

Introducing the 'A-Train'

2010-10-28
Mention the "A-Train" and most people probably think of the jazz legend Billy Strayhorn or perhaps New York City subway trains — not climate change. However, it turns out that a convoy of "A-Train" satellites has emerged as one of the most powerful tools scientists have for understanding our planet's changing climate. The formation of satellites — which currently includes Aqua, CloudSat, Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO) and Aura satellites — barrels across the equator each day at around 1:30 p.m. local time each afternoon, giving ...

Glucosamine causes the death of pancreatic cells

2010-10-28
Quebec City, October 27, 2010—High doses or prolonged use of glucosamine causes the death of pancreatic cells and could increase the risk of developing diabetes, according to a team of researchers at Université Laval's Faculty of Pharmacy. Details of this discovery were recently published on the website of the Journal of Endocrinology. In vitro tests conducted by Professor Frédéric Picard and his team revealed that glucosamine exposure causes a significant increase in mortality in insulin-producing pancreatic cells, a phenomenon tied to the development of diabetes. Cell ...

Heavy drinkers consume less over time, but not at 'normal' levels

2010-10-28
PISCATAWAY, NJ – Problem drinkers in the general population may reduce the amount of alcohol they consume over a period of years but not to the level of the average adult, according to a new study in the November issue of the Journal of Studies on Alcohol and Drugs. Given that heavy drinkers often don't become "normal" drinkers on their own, the takeaway message for clinicians and family members is to help connect a problem drinker to a community social service agency or Alcoholics Anonymous. Simply telling someone that they had a drinking problem did not seem to be helpful ...

Knowledge of genetic cancer risks often dies with patients, finds VCU Massey Cancer Center

2010-10-28
Richmond, Va. (Oct. 27, 2010) – If you were dying from cancer, would you consider genetic testing? A recent study conducted by researchers from Virginia Commonwealth University Massey Cancer Center showed that most terminally ill cancer patients who were eligible for genetic testing never received it despite that it could potentially save a relative's life. The research, "Exploring Hereditary Cancer Among Dying Cancer Patients—A Cross-Sectional Study of Hereditary Risk and Perceived Awareness of DNA Testing and Banking," was recently published in the Journal of Genetic ...

Addiction index updated

Addiction index updated
2010-10-28
The new version of the Addiction Severity Index (ASI) gives health professionals the opportunity to design an integral and personalised plan of assistance for patients suffering disorders due to substance abuse. Developed by the University of Pennsylvania (USA) in the 1980s, the ASI is the most used tool for studying disorders due to substance abuse. After more than 25 years of use, current trends have led ASI creators to update their index and adapt it to the present day reality. The new ASI-6 includes significant structure and content changes in regard to the previous ...

Cone of poison: The secret behind the cone snail's venom pump

2010-10-28
Scientists have discovered the secret of how an amazing sea snail injects its venom after shooting a harpoon-like tooth into its prey — or some unlucky swimmer — at jetliner speeds. The creatures, called cone snails, use a highly specialized structure that instantly pumps the paralyzing venom through the tooth and into its target. Their study appears in ACS' monthly Journal of Proteome Research. Helena Safavi-Hemami, Anthony Purcell and colleagues note that cone snails live mainly in the shallows of the world's tropical oceans. Prized by sea-shell collectors for their ...

Tobacco and its evil cousin, nicotine? They're good -- as a pesticide!

2010-10-28
Tobacco, used on a small scale as a natural organic pesticide for hundreds of years, is getting new scientific attention as a potential mass-produced alternative to traditional commercial pesticides. That's the topic of a report in ACS' bi-weekly journal Industrial & Engineering Chemistry Research. Cedric Briens and colleagues note that concerns about the health risks of tobacco have reduced demand and hurt tobacco farmers in some parts of the world. Scientists are looking for new uses for tobacco. One potential use is as a natural pesticide, due to tobacco's content ...

Small particles show big promise in beating unpleasant odors

2010-10-28
Scientists are reporting development of a new approach for dealing with offensive household and other odors — one that doesn't simply mask odors like today's room fresheners, but eliminates them at the source. Their research found that a deodorant made from nanoparticles — hundreds of times smaller than peach fuzz — eliminates odors up to twice as effectively as today's gold standard. A report on these next-generation odor-fighters appears in ACS' Langmuir, a bi-weekly journal. Brij Moudgil and colleagues note that consumers use a wide range of materials to battle undesirable ...

From touchpad to thought-pad?

2010-10-28
Move over, touchpad screens: New research funded in part by the National Institutes of Health shows that it is possible to manipulate complex visual images on a computer screen using only the mind. The study, published in Nature, found that when research subjects had their brains connected to a computer displaying two merged images, they could force the computer to display one of the images and discard the other. The signals transmitted from each subject's brain to the computer were derived from just a handful of brain cells. "The subjects were able to use their thoughts ...

Probing the mysterious second-wave of damage in head injury patients

2010-10-28
Why do some of the one million people who sustain head injuries annually in United States experience a mysterious second wave of brain damage days after the initial injury — just when they appear to be recovering? Limited clinical trials using an innovative new device to monitor brain chemistry on a second-by-second basis are underway to answer that life-and-death question, according to an article in the current issue of Chemical & Engineering News (C&EN), ACS' weekly newsmagazine. Brain injury is the leading cause of death and disability worldwide. C&EN Senior Editor ...

Concerns about the safety of certain 'healthful' plant-based antioxidants

2010-10-28
Scientists are calling for more research on the possibility that some supposedly healthful plant-based antioxidants — including those renowned for their apparent ability to prevent cancer — may actually aggravate or even cause cancer in some individuals. Their recommendation follows a study in which two such antioxidants — quercetin and ferulic acid — appeared to aggravate kidney cancer in severely diabetic laboratory rats. The study appears in ACS' bi-weekly Journal of Agricultural and Food Chemistry. Kuan-Chou Chen, Robert Peng, and colleagues note that vegetables, ...

NIST ships first programmable AC/DC 10-volt standard

NIST ships first programmable AC/DC 10-volt standard
2010-10-28
Extending its 26-year tradition of innovative quantum voltage standards, researchers at the National Institute of Standards and Technology (NIST) have begun shipping a new 10-volt standard to users around the world. The programmable system measures both direct current (DC) and alternating current (AC) voltages. NIST AC/DC 10-volt standard chip. The new 10-volt system* builds on a number of previous NIST inventions, from the initial 1-volt standard in 1984 through the 2006 unveiling of the world's first precision instrument for directly measuring AC voltages.** Because ...

Canada needs to improve end-of-life care

2010-10-28
Better psychological and spiritual support, improved planning of care and stronger relationships with physicians are necessary to improve end-of-life care in Canada, according to a study by a Queen's University professor. "High quality end-of-life care should be the right of every Canadian," says professor of Medicine and Epidemiology Daren Heyland, who is also a researcher at Kingston General Hospital. "But it's not always happening. We know from international studies that Canada ranks ninth in the world in terms of quality of care provided at the end of life." The study, ...

'Sí' on the new SI: NIST backs proposal for a revamped system of measurement units

Sí on the new SI: NIST backs proposal for a revamped system of measurement units
2010-10-28
Taking the first steps of what would be a major historical advance in the science of measurement, the National Institute of Standards and Technology (NIST) is participating in a worldwide effort to recommend major revisions to the International System of Units (SI), the modern metric system that is the basis of global measurements in commerce, science and other aspects of everyday life. The new SI, which would be based on seven constants of nature, would enable researchers around the world to express the results of measurements at new levels of consistency and accuracy. The ...
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